Archive for the ‘Programming’ Category

Installing Hpricot from Ruby Gems errors out

on Tuesday 31st March, 2009 Gabe speculated thusly…

I was recently trying to get a Ruby script working on Ubuntu. This script required Hpricot and using Ruby Gems to install Hpricot always resulted in an error:

 gem install hpricot --remote
ERROR:  While executing gem ... (Gem::FilePermissionError)
    You don't have write permissions into the /var/lib/gems/1.8 directory.
gabriel@windsor-telecom-2874:~/Music$ sudo gem install hpricot --remote
Building native extensions.  This could take a while...
ERROR:  Error installing hpricot:
	ERROR: Failed to build gem native extension.

/usr/bin/ruby1.8 extconf.rb install hpricot --remote
extconf.rb:1:in `require': no such file to load -- mkmf (LoadError)
	from extconf.rb:1

Gem files will remain installed in /var/lib/gems/1.8/gems/hpricot-0.7 for inspection.
Results logged to /var/lib/gems/1.8/gems/hpricot-0.7/ext/hpricot_scan/gem_make.out

The answer was simple:
sudo aptitude install ruby-dev

Just install the Ruby Dev package, this will also allow you to install lots of other gems such as SQLite3, etc.

Posted in Development, Ruby, Ubuntu

1 Comment »

Starting with Symfony – Internal Server Error

on Tuesday 13th January, 2009 Gabe speculated thusly…

You will get an internal server error unless you set:
magic_quotes_gpc = Off
in your php.ini file.

Posted in Frameworks, Programming, Uncategorized

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Making CodeIgniter’s Profiler AJAX compatible

on Tuesday 13th January, 2009 Gabe speculated thusly…

Modern web applications almost all make use of AJAX to enhance their user appeal. However, AJAX can be hard to debug, especially when all the traditional tools do little to help. When doing standard PHP coding CodeIgniter (CI) offers a profiler which will be appended to the bottom of generated pages. This gives you information on the request that was recently processed, including any POST or GET values passed to the script, how long execution took and how long any SQL queries took as well as what those queries actually were. During development I find this information indispensable to make sure my SQL queries are correct and things are working as I want.

However, when coding up AJAX aspects of the application this doesn’t work very well, any page fragments fed back to the JavaScript will have the profiler stuck at the bottom, and since these fragments are usually inserted inside DIVs the profiler cannot be read in it’s entirety, or it breaks the layout, or more likely, both of the above. Therefore I set out to find a way of making it AJAX compatible, so that it would always end up at the bottom of the page, even when it was originally returned appended to a page fragment. In the end this turned out easier than anticipated.

One small change needs to be made to your footer, you need to create an empty div with an ID of “debug”, this div will hold the profiler, so place the div where you want the profiler. The advantage with this is that you cannot see it when it is empty so it could even be left in for production code. The div looks like this:
<div id="debug"></div>

Now we need to extend, or rather override the CI profiler so create the file system/application/libraries/MY_Profiler.php

Replace MY_ with the value of $config['subclass_prefix'] found in your config file, by default it is MY_.

Next paste the following code in to it. Remember to change the name of the class as dictated by the filename you use, also change the name of the constructor function too. You can also change the script line to load the jQuery library from one of your servers, or even rewrite the entire script section to use any JavaScript you like.

<?php if (!defined('BASEPATH')) exit('No direct script access allowed');

class MY_Profiler extends CI_Profiler
{
    function MY_profiler()
    {
        parent::CI_Profiler();
    }

    function run()
    {
            $output = <<<ENDJS
<script src="http://code.jquery.com/jquery-latest.js" />
<script type="text/javascript" language="javascript" charset="utf-8">
// < ![CDATA[
    $(document).ready(function() {
        var html = $('#codeigniter_profiler').clone();
        $('#codeigniter_profiler').remove();
        $('#debug').hide().empty().append(html).fadeIn('slow');
    });
// ]]>
</script>
ENDJS;
            $output .= "<div id='codeigniter_profiler' style='font-size: 0.7em; clear:both;background-color:#fff;padding:10px;'>";
            $output .= $this->_compile_uri_string();
            $output .= $this->_compile_controller_info();
            $output .= $this->_compile_memory_usage();
            $output .= $this->_compile_benchmarks();
            $output .= $this->_compile_get();
            $output .= $this->_compile_post();
            $output .= $this->_compile_queries();
            $output .= '</div>';
            return $output;
    }
}

If you have already loaded a jQuery library in your header somewhere then make sure this ajax fragment doesn’t load jQuery again – otherwise all your event bindings and everything else will fail. If this is the case simply remove the line:

<script src="http://code.jquery.com/jquery-latest.js" />

From the above code.

That should be it, hit me back if you have any feedback, questions, or need some help.

Posted in CodeIgniter, Development, Frameworks, Operating System, PHP, Programming

9 Comments »

Inserting large blobs in MySQL

on Monday 12th January, 2009 Gabe speculated thusly…

Last week I setup MySQL replication for a database with two slaves. I wanted to see how resilient it was, and one of the tests I wanted to perform was to create a record on the master and then interrupt the replication of the same record on the slave. This would allow me to see whether MySQL could recover from such an error.

So I thought the easiest way of doing this would be to to insert a large 700mb
file in to MySQL – to give me enough time to interrupt a slave before
replication had completed. Thus being able to test MySQL’s resilience to
loss of connectivity during UPDATE/INSERT queries.

I have never used BLOB columns before so my quest took my on a journey during which I learned a lot about these blobs. Now, even though a MySQL long blob can hold 4GB of data I have encountered
problem after problem dealing with it:

PHP scripts are limited to 32MB memory maximum, this can be upped, but
is not scalable and not a good solution. It means that you cannot simply
read the data of file and perform an INSERT since the file data is
stored in PHP’s memory first. This meant the development of a PHP script
that could read chunks (just a meg or so) from a file and perform UPDATE
queries along with MySQL CONCAT function to effectively append each
chunk.

CONCAT, as I eventually found out, returns NULL if any of it’s arguments
are NULL. In my case when attempting to UPDATE a row with additional
chunks the resulting blob size was always zero. This was because the
very first time CONCAT is used the blob field is empty (NULL), therefore
CONCAT always returned NULL – and so, the data in the blob column never
grew. The query looked like this:
UPDATE `$table` SET `data` = CONCAT(data, '{mysqli_real_escape_string($buffer)}') WHERE `id`=$id";

I then combined CONCAT with COALESCE which will return an alternative
value that you specify in the eventuality the first argument is NULL. By
combining these two I could overcome the above problem.
Resulting query structure:
UPDATE `$table` SET `data` = COALESCE(CONCAT(data, '{mysqli_real_escape_string($buffer)}'), '') WHERE `id`=$id";

Great, now we’re finally adding our chunks on. Then my computer ran out
of disc space – the reason: 7 gigs of MySQL replication logs. Took a
while to find that out. Fixed.

Next problem, although I was certain (via in-depth PHP debugging) that
PHP was correctly reading chunks from the file in a consecutive order,
of the correct size, and the SQL query was being properly executed
without any sly errors the blob column would never end up growing above
12MB (according the PHP MyAdmin). Through even more intensive debugging
I found that after concatenating each chunk the blob would grow by the
correct amount up to 16MB, then it would zero and start again. The
result of pushing a 700MB ISO in to it would always be less 16MB.

Working from a hunch I upped the max_packet_size in my.conf from 16MB to
36MB, the result was as above but this time the blob would grow to 32MB
before zeroing itself.

I then found this MySQL bug report:
http://bugs.mysql.com/bug.php?id=22853

It is considered a bug simply because by upping max_packet_size to
something like 4GB or anything substantial leaves the MySQL server open
to network DoS attacks. There is no work around. A fix is scheduled for
version 6.

Anyway, since we don’t care about security I maxed out the packet_size,
and my chunking script worked, but very quickly I noticed a huge amount of
slowdown once the blob had grown to just a few tens of megs. In fact it
took about 20 minutes to get to 200MB. Without supporting my theory with
any evidence I reckon the CONCAT function reads all the data out of the
database in to memory, does it’s stuff and then stuffs it back in to the
database. The result is an increasingly slow query.

It would seem that although MySQL supports blobs of about 4GB that you
can never get that size unless you:

1. Change the max_packet_size to a stupidly high number, leaving your
server open to DoS attacks so then you can just do a single INSERT. Using CONCAT
is out since it would take forever.

2. Change the memory limit of PHP scripts to be greater than 4GB.

3. Have absolutely bags of RAM since three copies of the file are stored
in RAM (certainly two copies). Since you cannot chunk the file and
perform CONCATS PHP will read the entire file in to it’s memory. This
will all then be buffered by the MySQL driver. Then this is passed to
the database. Therefore if you wish to insert a 4 GB file you will
require >12GB of RAM.

One work around is to chunk the file as before but each chunk is
represented by a single row. These can then be linked together by giving
each row a master file ID, so that all necessary rows can be retrieved.

For my purposes this doesn’t help, I needed queries that took a while,
inserting rows like this will take but a fraction of a second each.

Posted in Development, Information, MySQL, PHP, Programming, Server

3 Comments »

Beware of the Trailing Comma in JavaScript Prototypes

on Wednesday 3rd December, 2008 Gabe speculated thusly…

Came accross the following post at:
http://www.pluralsight.com/community/blogs/fritz/archive/2007/06/19/47771.aspx

“I spent more time than I care to admit tracking down this one, perhaps this post will save someone else the trouble…

When defining a number of functions in a prototype in JavaScript, do not include a trailing comma after the last function:

MyType.prototype = {
    foo : function() {
          // ...
    },

    bar : function() {
        //...
    }, //< - fails in IE!
 }

What was especially tricky about tracking this problem down was that FireFox works with or without the trailing comma, so it only fails in IE!"

Posted in Books, Development, JavaScript, Linux, Operating System, PHP, Programming

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IE doesn’t recognise “select option”.click()

on Friday 14th November, 2008 Gabe speculated thusly…

Instead of:
$(‘#ranges option’).click(function() {
var val = $(this).val();
//do something with val
});

Had to change it to:
$(‘#ranges’).change(function() {
var val = $(this).val();
//do something with val
});

Posted in Development, JavaScript, jQuery, Programming

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Using Python Doctests in Django with fixtures

on Tuesday 24th June, 2008 Gabe speculated thusly…

Django is a pretty decent web framework for Python. Having brushed up on my Python programming I started to fall in love with doctests. I then went ahead and wrote about 100 lines of doctest for model in Django, then found all tests were failing because the database fixtures weren’t being loaded.

I couldn’t find out how to install fixtures inside doctests from the official documentation, I did however, come across what seemed like a web page written in Japanese. I had to skip the Japanese but figured out the code samples. Getting fixtures working with doctests in django is fairly simple – once you know how!

At the top of your doctest you will need the following two lines:
>>> from django.core import management
>>> management.call_command("loaddata", "project/fixtures/test.json", \
verbosity=0)

Replace project and test.json with your project name and fixture. Then continue with the doctests as per usual. After they are done put the following line at the end of the doctest:
>>> management.call_command("flush", verbosity=0, interactive=False)

That should be just about it :)

Posted in Development, Django, Frameworks, Programming, Python

No Comments »

HTML Helper for generating a country drop-down list in CodeIgniter

on Friday 9th May, 2008 Gabe speculated thusly…

Frustrated at having to create my own drop-down country lists in CI I created a helper for it. It can even work with the CI Validation class, so if the form is submitted and fails validation when it is redisplayed the same country is selected as the form was submitted with.

Download the file MY_form_helper.php and put it in the folder: /system/application/helpers/.

Download the file countries.php and place that in /system/application/config/.

You will now be able to create drop-down lists of countries in your views like this:
< ?=form_countries( 'country', $this->validation->country, array( 'style' => 'width: 250px' ) )?>

Ensure that you create a validation rule called “country” in your controller and that you are loading the form helper.

form_countries() takes three arguments. The first is the name you would like to give the select box, this is required. The second is the country to select by default – this could be something like ‘GB’, or $this->validation->country, otherwise you can leave it blank. The third argument is any additional properties to give the select box, you can leave this blank, or pass an array. In the example above we also set the width to 250x. The country chosen by the user will be returned to the script as a two-letter ISO country code, if you are validating this then you can set the min and max length values as 2, and accept alphabetical characters only. If using MySQL as your database you will get best performance by creating a column of the type char with a length of 2.

Posted in CodeIgniter, Development, Frameworks, PHP, Programming

6 Comments »

Profiling in CodeIgniter

on Tuesday 6th May, 2008 Gabe speculated thusly…

Profiling an application is a great way to see how it is performing. CodeIgniter comes with a profiling class, which you can make calls to from your controllers. However, during development I find profiling so helpful that I want it on all my pages, without having to specifically call it each time. I also want to be able to deploy my development site to a production server – making calls to the profiler throughout the controllers means I would need to edit each and every controller to make sure the profiler wasn’t active on the live server.

After much searching I discovered a better solution. This allows you to add profiling to the bottom of every page (along with its debug info and SQL query info). When you copy the dev site live you just exclude 1 file, and profiling will be removed totally. All you need to do is create a file called MY_Output.php in system/application/libraries that extends the Output core class, with the following contents:

< ?php
# /system/application/libraries/MY_Output.php
if (!defined('BASEPATH')) exit('No direct script access allowed');
class MY_Output extends CI_Output {
function __construct() {
parent::__construct();
$this->enable_profiler( TRUE );
}
}
?>

This will enable profiling output on all your pages for development and debug purposes. When you copy your site to a production server just make sure you don’t copy MY_Output.php file. I normally use rsync for copying live and just add: --exclude="MY_Output.php" to the rsync command.

The condition to using the name MY_Output.php is that you left the variable $config['subclass_prefix'] in config.php as default. This defaults to $config['subclass_prefix'] = 'MY_';, so if you change it you will need to alter the filename of your new class.

Posted in CodeIgniter, Development, Frameworks, HowTo, PHP, Programming

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Grope, a Ruby script for enhanced Grepping

on Wednesday 19th March, 2008 Gabe speculated thusly…

There was a time when I would recursively grep the contents of literally thousands of files at a time to search for particular occurances of characters. The usual starting place was something using grep, which we can time for crude benchmarking:

user@localhost$ time grep -rn 'hello' *
templates/temp.tpl:1:hello

real 1m56.190s
user 0m1.400s
sys 0m0.940s

Using Ruby to write a script, which I named Grope, I made the search process 450 times faster, reducing an operation that took more than a minute to taking a blink of an eye…

user@localhost$ time grope 'hello'
templates/festival/06/temp.tpl: 1
hello...

real 0m0.181s
user 0m0.100s
sys 0m0.070s

Posted in Development, Operating System, Programming, Ruby

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